BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011H10LP1|AL426290
(771 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1305 1388 0.0
>3x_Contig1305
Length = 9229
Score = 1388 bits (685), Expect = 0.0
Identities = 739/771 (95%), Gaps = 2/771 (0%)
Strand = Plus / Minus
Query: 1 cgttttccgatccccaattactggaaattttcaaccctggaacggttttacgagttttcc 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3985 cgttttccgatcccaaattactggaaattttcaaccctggaacggttttacgagttttcc 3926
Query: 61 tttcatcgcttctmcgmttctgtctggtacccaaattttgacctttgcctgacatctcmc 120
||||||||||||| || |||||||||||||||||||||||| |||||||||| ||||| |
Sbjct: 3925 tttcatcgcttctacgattctgtctggtacccaaattttgaactttgcctgaaatctcac 3866
Query: 121 tatactcattagtaccggtmmtctttggtgtctgtcttttagccgtacctgtttgtacta 180
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 3865 tatactcattagtaccggtaatctttggtgtctgtcttttagccgtacctgtttgtacta 3806
Query: 181 ccgggccattggcttcctctagtatccgttctttgtgttctttctctaamattttyacca 240
|||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 3805 ccgggccattgg-ttcctctagtatccgttctttgtgttctttctctaaaatttttacca 3747
Query: 241 ccacggtcttgaccattacggmcttgtctattatccctgggtttatttcctccggmtctg 300
||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 3746 ccacggtcttgaccattacggacttgtctattatccctgggtttatttcctccggatctg 3687
Query: 301 tcmtcmmatcttgctgtttgtctcttatcttccctcccagctgacctcacctttctgtca 360
|| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3686 tcatcaaatcttgctgtttgtctcttatcttccctcccagctgacctcacctttctgtca 3627
Query: 361 gatcttggtttacgtggttctcttgccttgataggmacttccttcactctttgcmaaact 420
||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 3626 gatcttggtttacgtggttctcttgccttgataggaacttccttcactctttgcaaaact 3567
Query: 421 gatgctaaamagtccggagagacagagctataagcccttttagagaatgtagaagctagc 480
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3566 gatgctaaaaagtccggagagacagagctataagcccttttagagaatgtagaagctagc 3507
Query: 481 attattaagtmaatctmtycmtgctagtcacacacttaaacagatcacaacttgatatag 540
|||||||||| ||| | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 3506 attattaagtaaatatattaatgctagtcacacacttaaacagatcacaacttgatatag 3447
Query: 541 cgttacctggtttattacmaccctatacctaamtmtctccgtgataccataagavctaat 600
|||||||||||||||||| ||||||||||||| | ||||||||||||||||||| |||||
Sbjct: 3446 cgttacctggtttattacaaccctatacctaaatatctccgtgataccataagaactaat 3387
Query: 601 camgttcatcatactgamacgagtttgcgcactctcataggttttatgaaagatcaaaaa 660
|| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 3386 caagttcatcatactgaaacgagttt-cgcactctcataggttttatgaaagatcaaaaa 3328
Query: 661 ttttcaaggcgttcaaaatgataaaaacacacgtgatctaaatttcttatgatgacagaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3327 ttttcaaggcgttcaaaatgataaaaacacacgtgatctaaatttcttatgatgacagaa 3268
Query: 721 ggaatacaacattcggtgggttctgacgttttgatatgaacttaatacaac 771
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3267 ggaatacaacattcggtgggttctgacgttttgatatgaacttaatacaac 3217
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3779
Number of Sequences: 1807
Number of extensions: 3779
Number of successful extensions: 71
Number of sequences better than 1.0e-20: 1
length of query: 771
length of database: 10,358,551
effective HSP length: 16
effective length of query: 755
effective length of database: 10,329,639
effective search space: 7798877445
effective search space used: 7798877445
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (99.7 bits)